Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HPS1Q92902 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 AC107918.4-201ENST00000641966 3141 ntBASIC14.92□□□□□ -0.02
HPS1Q92902 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
HPS1Q92902 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.92□□□□□ -0.02
HPS1Q92902 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.92□□□□□ -0.02
HPS1Q92902 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.92□□□□□ -0.02
HPS1Q92902 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.92□□□□□ -0.02
HPS1Q92902 AF228730.7-201ENST00000641842 219 ntBASIC14.92□□□□□ -0.02
HPS1Q92902 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HPS1Q92902 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HPS1Q92902 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.92□□□□□ -0.02
HPS1Q92902 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 AC007191.1-201ENST00000623179 2995 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 MYCLP1-201ENST00000372451 1075 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 IGHV3-52-201ENST00000519770 353 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 KRT18P58-201ENST00000527480 1120 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 AC139887.3-201ENST00000568585 713 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.91□□□□□ -0.02
HPS1Q92902 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HPS1Q92902 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 AC007292.2-201ENST00000593524 1812 ntBASIC14.91□□□□□ -0.02
HPS1Q92902 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HPS1Q92902 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HPS1Q92902 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms