Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 MIR1202-201ENST00000408529 83 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 EEF1DP5-201ENST00000431410 772 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 MIR4492-201ENST00000581627 80 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AC092299.1-201ENST00000632679 757 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AL162426.1-201ENST00000624141 743 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AL627095.1-201ENST00000414775 321 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 MRPL22P1-201ENST00000505398 616 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 FAM86B3P-203ENST00000523992 854 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 TREHP1-201ENST00000531328 465 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AP003170.2-201ENST00000544730 786 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 AC093484.2-201ENST00000580996 2166 ntBASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SYNE2Q8WXH0 ZNF436-AS1-201ENST00000335648 2547 ntBASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 AC073150.1-201ENST00000450406 1084 ntBASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 FBXO36P1-201ENST00000579006 471 ntBASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 AL023803.2-201ENST00000620080 638 ntBASIC6.34□□□□□ -1.4
SYNE2Q8WXH0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RPL4P6-201ENST00000438116 1304 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AL589702.1-201ENST00000641229 1509 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SOD1-202ENST00000389995 865 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SPTLC1P3-201ENST00000403408 259 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AL049542.1-201ENST00000430231 278 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms