Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC069224.1-201ENST00000566372 1715 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC099063.4-201ENST00000641099 1602 ntBASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC098831.1-202ENST00000438821 336 ntBASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC116407.3-201ENST00000623905 1129 ntBASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.69□□□□□ -0.22
RTN4IP1Q8WWV3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AC131009.4-201ENST00000624048 1740 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 MIR648-201ENST00000385046 94 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AC107918.2-201ENST00000530817 355 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AC091167.2-201ENST00000579581 588 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 PPT1-215ENST00000641471 2368 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 AL136379.1-201ENST00000623471 2642 ntBASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RTN4IP1Q8WWV3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms