Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCC2Q8TAQ2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 AL645939.2-201ENST00000427340 991 ntBASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 AC025678.2-201ENST00000562061 970 ntBASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 AC027796.2-201ENST00000575326 344 ntBASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCC2Q8TAQ2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AC105233.2-201ENST00000523697 349 ntBASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AF228730.5-201ENST00000530288 346 ntBASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCC2Q8TAQ2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 MIR346-201ENST00000362234 95 ntBASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.9■□□□□ 0.62
SMARCC2Q8TAQ2 AC084121.4-201ENST00000641598 221 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms