Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 KRT18P13-201ENST00000400056 1290 ntBASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 DNAJB3-202ENST00000449667 1266 ntBASIC17.24■□□□□ 0.35
LMO3Q8TAP4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC007967.4-201ENST00000614700 386 ntBASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 AC020658.6-201ENST00000623564 1870 ntBASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.24■□□□□ 0.35
LMO3Q8TAP4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AL139400.1-201ENST00000366220 510 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 SPDYE17-201ENST00000412399 783 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 HLA-J-203ENST00000494367 1087 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC097359.3-201ENST00000603982 1210 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC026979.3-201ENST00000607315 403 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 AC023511.2-201ENST00000618803 211 ntBASIC17.23■□□□□ 0.35
LMO3Q8TAP4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO3Q8TAP4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms