Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AP003680.1-201ENST00000598970 3660 ntBASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 IGHV3-62-201ENST00000520057 340 ntBASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AC024267.1-201ENST00000582320 895 ntBASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH19Q8TAB3 AC011477.6-201ENST00000604980 1927 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 AP001282.1-201ENST00000531301 1499 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 HMGN1P19-201ENST00000436976 333 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 RNA5SP410-201ENST00000516285 106 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 AL513210.1-201ENST00000629608 234 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 UXT-AS1-201ENST00000590504 1525 ntBASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH19Q8TAB3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms