Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 AC005622.1-201ENST00000636801 1703 ntBASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.24□□□□□ -0.13
SEMA6DQ8NFY4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEMA6DQ8NFY4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 NORAD-201ENST00000565493 5339 ntBASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ALG1L5P-201ENST00000482043 771 ntBASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 AC005829.1-201ENST00000570002 483 ntBASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 U82695.1-201ENST00000635752 1889 ntBASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 AC024909.3-201ENST00000611513 2257 ntBASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SEMA6DQ8NFY4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms