Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 AC010654.1-201ENST00000615722 808 ntBASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
DNAAF1Q8NEP3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC073648.2-201ENST00000510116 352 ntBASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC136632.2-201ENST00000512891 861 ntBASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 OR7E14P-202ENST00000530490 1290 ntBASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC107918.2-201ENST00000530817 355 ntBASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC087641.1-201ENST00000557561 1021 ntBASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
DNAAF1Q8NEP3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.3□□□□□ -0.12
DNAAF1Q8NEP3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms