Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 MIR3180-1-201ENST00000580374 94 ntBASIC15.81■□□□□ 0.12
HIPK4Q8NE63 MIR3180-3-201ENST00000584616 94 ntBASIC15.81■□□□□ 0.12
HIPK4Q8NE63 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 AC006486.2-201ENST00000624246 2199 ntBASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 AC026748.1-201ENST00000624349 3251 ntBASIC15.81■□□□□ 0.12
HIPK4Q8NE63 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 AC243591.1-201ENST00000452967 1364 ntBASIC15.8■□□□□ 0.12
HIPK4Q8NE63 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 MIR5100-201ENST00000579544 119 ntBASIC15.8■□□□□ 0.12
HIPK4Q8NE63 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 AC099336.1-202ENST00000602961 463 ntBASIC15.8■□□□□ 0.12
HIPK4Q8NE63 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 SNX33P1-201ENST00000592116 1762 ntBASIC15.8■□□□□ 0.12
HIPK4Q8NE63 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIPK4Q8NE63 AC069224.1-201ENST00000566372 1715 ntBASIC15.8■□□□□ 0.12
HIPK4Q8NE63 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms