Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 PMS2P2-201ENST00000425039 1128 ntBASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 EEF1DP4-201ENST00000446006 880 ntBASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AL079307.3-201ENST00000556114 283 ntBASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 AC046158.3-201ENST00000624947 2558 ntBASIC14.26□□□□□ -0.13
ZIC4Q8N9L1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AC107890.1-201ENST00000422478 521 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 FAM86GP-201ENST00000448322 971 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms