Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PRORSD1P-202ENST00000563365 2154 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 SPDYE17-201ENST00000412399 783 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 YBX1P6-201ENST00000442962 1002 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 FO681548.1-201ENST00000455617 1132 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AC074044.1-201ENST00000609673 707 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 CU634019.7-201ENST00000624153 1185 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 FP236241.2-201ENST00000624906 1185 ntBASIC12.65□□□□□ -0.38
C3orf56Q8N813 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C3orf56Q8N813 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.65□□□□□ -0.38
C3orf56Q8N813 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
C3orf56Q8N813 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.65□□□□□ -0.39
C3orf56Q8N813 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
C3orf56Q8N813 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
C3orf56Q8N813 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.64□□□□□ -0.39
C3orf56Q8N813 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C3orf56Q8N813 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms