Protein–RNA interactions for Protein: Q8N488

RYBP, RING1 and YY1-binding protein, humanhuman

Predicted RBP Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYBPQ8N488 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 AC005622.1-201ENST00000636801 1703 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.62■□□□□ 0.25
RYBPQ8N488 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RYBPQ8N488 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.62■□□□□ 0.25
RYBPQ8N488 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.62■□□□□ 0.25
RYBPQ8N488 SPDYE7P-202ENST00000420373 878 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 CNN2P2-201ENST00000443536 909 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 CNN2P3-201ENST00000450201 906 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.62■□□□□ 0.25
RYBPQ8N488 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.62■□□□□ 0.25
RYBPQ8N488 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.62■□□□□ 0.25
RYBPQ8N488 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.62■□□□□ 0.25
RYBPQ8N488 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.62■□□□□ 0.25
RYBPQ8N488 AC003101.2-201ENST00000612557 442 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 AL136317.3-201ENST00000618497 906 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 AP001059.3-201ENST00000619053 235 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.62■□□□□ 0.25
RYBPQ8N488 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.62■□□□□ 0.25
RYBPQ8N488 AC084121.4-201ENST00000641598 221 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 AF228730.8-201ENST00000642140 221 ntBASIC16.62■□□□□ 0.25
RYBPQ8N488 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RYBPQ8N488 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RYBPQ8N488 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RYBPQ8N488 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RYBPQ8N488 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.61■□□□□ 0.25
RYBPQ8N488 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 AP3S2-216ENST00000617003 1561 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RYBPQ8N488 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 HLA-H-201ENST00000383620 1096 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 SPDYE14P-201ENST00000442619 822 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.61■□□□□ 0.25
RYBPQ8N488 AC093724.1-201ENST00000448659 1027 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 AC098859.1-201ENST00000502915 1238 ntBASIC16.61■□□□□ 0.25
RYBPQ8N488 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.61■□□□□ 0.25
RYBPQ8N488 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.61■□□□□ 0.25
RYBPQ8N488 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.61■□□□□ 0.25
RYBPQ8N488 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
RYBPQ8N488 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RYBPQ8N488 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.61■□□□□ 0.25
RYBPQ8N488 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RYBPQ8N488 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RYBPQ8N488 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RYBPQ8N488 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.6■□□□□ 0.25
RYBPQ8N488 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.6■□□□□ 0.25
RYBPQ8N488 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RYBPQ8N488 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RYBPQ8N488 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.6■□□□□ 0.25
RYBPQ8N488 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms