Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 KRT43P-201ENST00000434019 910 ntBASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPOQ8N3V7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 FLJ38576-201ENST00000623820 2459 ntBASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 AC092068.3-201ENST00000587894 2016 ntBASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNPOQ8N3V7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 AL031731.1-201ENST00000642131 2094 ntBASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 AC092552.1-201ENST00000547243 906 ntBASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNPOQ8N3V7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms