Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VRK2Q86Y07 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK2Q86Y07 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 AL591424.1-201ENST00000442569 1213 ntBASIC14.98□□□□□ -0.01
VRK2Q86Y07 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 AC112191.1-201ENST00000523689 701 ntBASIC14.98□□□□□ -0.01
VRK2Q86Y07 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VRK2Q86Y07 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK2Q86Y07 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.97□□□□□ -0.01
VRK2Q86Y07 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 FAM197Y3-203ENST00000618346 717 ntBASIC14.97□□□□□ -0.01
VRK2Q86Y07 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK2Q86Y07 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK2Q86Y07 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VRK2Q86Y07 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VRK2Q86Y07 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.96□□□□□ -0.01
VRK2Q86Y07 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VRK2Q86Y07 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms