Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 SPDYE15P-201ENST00000424157 909 ntBASIC13.52□□□□□ -0.25
ZNF546Q86UE3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 MIR4497-201ENST00000583208 89 ntBASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 AL353593.2-201ENST00000602529 1483 ntBASIC13.52□□□□□ -0.25
ZNF546Q86UE3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 SNX33P1-201ENST00000592116 1762 ntBASIC13.52□□□□□ -0.25
ZNF546Q86UE3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC041040.2-201ENST00000622926 2899 ntBASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 LIN28AP1-201ENST00000429574 405 ntBASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 COX11P1-201ENST00000489116 835 ntBASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 PGM5P2-202ENST00000637225 1043 ntBASIC13.51□□□□□ -0.25
ZNF546Q86UE3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZNF546Q86UE3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms