Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.34■□□□□ 0.21
RAPH1Q70E73 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.34■□□□□ 0.21
RAPH1Q70E73 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 AL160237.2-201ENST00000556165 472 ntBASIC16.34■□□□□ 0.21
RAPH1Q70E73 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 AC021097.1-201ENST00000607902 574 ntBASIC16.34■□□□□ 0.21
RAPH1Q70E73 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 AC099063.4-201ENST00000641099 1602 ntBASIC16.34■□□□□ 0.21
RAPH1Q70E73 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.21
RAPH1Q70E73 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAPH1Q70E73 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RAPH1Q70E73 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 FAM185BP-201ENST00000443595 716 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 AC092910.1-201ENST00000482027 1129 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 CXCL1P1-201ENST00000502804 216 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ACTL9-202ENST00000612068 1252 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 AL592424.1-201ENST00000563624 1536 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 U82695.1-201ENST00000635752 1889 ntBASIC16.33■□□□□ 0.2
RAPH1Q70E73 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAPH1Q70E73 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAPH1Q70E73 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 RNU1-129P-201ENST00000384064 167 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms