Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 AC131009.4-201ENST00000624048 1740 ntBASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00299Q6ZSB3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 MYO15B-237ENST00000642007 4893 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AC099521.3-201ENST00000624251 2938 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 WASH3P-207ENST00000560956 1394 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 FO538757.1-201ENST00000623083 1397 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AL645939.2-201ENST00000427340 991 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AC073592.5-201ENST00000624854 528 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 AC113367.3-201ENST00000508316 1912 ntBASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00299Q6ZSB3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LINC00299Q6ZSB3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LINC00299Q6ZSB3 LINC01230-201ENST00000625222 3017 ntBASIC14.15□□□□□ -0.15
LINC00299Q6ZSB3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00299Q6ZSB3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms