Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RNF43Q68DV7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
RNF43Q68DV7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF43Q68DV7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF43Q68DV7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.02■□□□□ 0.31
RNF43Q68DV7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF43Q68DV7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF43Q68DV7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF43Q68DV7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 FOXO1B-201ENST00000504678 1527 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 MIR943-201ENST00000401286 94 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 AC007274.1-201ENST00000439805 662 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 SPDYE14P-201ENST00000442619 822 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 KRT18P34-201ENST00000488218 1270 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 AL008721.1-201ENST00000609964 604 ntBASIC17.01■□□□□ 0.31
RNF43Q68DV7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF43Q68DV7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF43Q68DV7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17■□□□□ 0.31
RNF43Q68DV7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17■□□□□ 0.31
RNF43Q68DV7 AC105233.2-201ENST00000523697 349 ntBASIC17■□□□□ 0.31
RNF43Q68DV7 AF228730.5-201ENST00000530288 346 ntBASIC17■□□□□ 0.31
RNF43Q68DV7 SLC25A39P2-201ENST00000537614 270 ntBASIC17■□□□□ 0.31
RNF43Q68DV7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17■□□□□ 0.31
RNF43Q68DV7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17■□□□□ 0.31
RNF43Q68DV7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF43Q68DV7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17■□□□□ 0.31
RNF43Q68DV7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF43Q68DV7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF43Q68DV7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF43Q68DV7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms