Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00242Q5T6M2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AC012569.1-201ENST00000591191 1524 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 SART3-203ENST00000546611 1184 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AL049597.2-201ENST00000565575 961 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AL732292.2-201ENST00000609649 430 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AC092119.3-201ENST00000612618 583 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 AL355877.3-201ENST00000622820 899 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00242Q5T6M2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms