Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DSC1Q08554 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
DSC1Q08554 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DSC1Q08554 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.03■□□□□ 0.32
DSC1Q08554 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.03■□□□□ 0.32
DSC1Q08554 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.03■□□□□ 0.32
DSC1Q08554 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 RAB43P1-201ENST00000561790 589 ntBASIC17.03■□□□□ 0.32
DSC1Q08554 AC008735.3-201ENST00000596646 500 ntBASIC17.03■□□□□ 0.32
DSC1Q08554 AC017083.2-201ENST00000608069 979 ntBASIC17.03■□□□□ 0.32
DSC1Q08554 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
DSC1Q08554 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DSC1Q08554 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.03■□□□□ 0.32
DSC1Q08554 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
DSC1Q08554 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DSC1Q08554 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DSC1Q08554 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.02■□□□□ 0.32
DSC1Q08554 FAM86LP-201ENST00000478302 853 ntBASIC17.02■□□□□ 0.32
DSC1Q08554 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.02■□□□□ 0.32
DSC1Q08554 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.02■□□□□ 0.32
DSC1Q08554 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 AC015936.2-201ENST00000593177 259 ntBASIC17.02■□□□□ 0.32
DSC1Q08554 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.02■□□□□ 0.32
DSC1Q08554 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
DSC1Q08554 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
DSC1Q08554 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DSC1Q08554 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.02■□□□□ 0.31
DSC1Q08554 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DSC1Q08554 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms