Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PMS2P1-201ENST00000431037 1228 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AF186996.4-201ENST00000467186 377 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 RNPS1P1-201ENST00000507437 918 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 CYP2A7P1-201ENST00000595391 815 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AL596087.1-201ENST00000400979 1969 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 CICP4-201ENST00000447359 2812 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 MYO15B-237ENST00000642007 4893 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 FAM197Y8-203ENST00000450145 560 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AC087641.1-201ENST00000557561 1021 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AC005412.3-201ENST00000580309 715 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 MIR4492-201ENST00000581627 80 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AC005593.1-201ENST00000624894 515 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AL512652.2-201ENST00000625156 1716 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 AL031731.1-201ENST00000642131 2094 ntBASIC12.47□□□□□ -0.41
HIST1H1AQ02539 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H1AQ02539 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms