Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 MEP1AP4-201ENST00000423244 1087 ntBASIC18.84■□□□□ 0.61
IRX3P78415 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.84■□□□□ 0.61
IRX3P78415 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 AL162274.1-201ENST00000617191 1098 ntBASIC18.84■□□□□ 0.61
IRX3P78415 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 AC004461.2-201ENST00000629517 803 ntBASIC18.84■□□□□ 0.61
IRX3P78415 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
IRX3P78415 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX3P78415 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX3P78415 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
IRX3P78415 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX3P78415 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
IRX3P78415 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX3P78415 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
IRX3P78415 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
IRX3P78415 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX3P78415 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX3P78415 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.83■□□□□ 0.6
IRX3P78415 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.83■□□□□ 0.6
IRX3P78415 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.83■□□□□ 0.6
IRX3P78415 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.83■□□□□ 0.6
IRX3P78415 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.83■□□□□ 0.6
IRX3P78415 AL109936.8-201ENST00000641772 604 ntBASIC18.83■□□□□ 0.6
IRX3P78415 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
IRX3P78415 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.83■□□□□ 0.6
IRX3P78415 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.83■□□□□ 0.6
IRX3P78415 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
IRX3P78415 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.83■□□□□ 0.6
IRX3P78415 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX3P78415 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
IRX3P78415 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
IRX3P78415 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
IRX3P78415 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.82■□□□□ 0.6
IRX3P78415 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 AL139010.1-201ENST00000454878 894 ntBASIC18.82■□□□□ 0.6
IRX3P78415 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.82■□□□□ 0.6
IRX3P78415 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
IRX3P78415 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms