Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.57□□□□□ -0.08
VBP1P61758 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 Z99916.2-201ENST00000604037 246 ntBASIC14.57□□□□□ -0.08
VBP1P61758 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 AL592424.1-201ENST00000563624 1536 ntBASIC14.56□□□□□ -0.08
VBP1P61758 AC008677.1-201ENST00000519230 1561 ntBASIC14.56□□□□□ -0.08
VBP1P61758 FGD5P1-202ENST00000614866 2498 ntBASIC14.56□□□□□ -0.08
VBP1P61758 AC148477.5-201ENST00000625164 1645 ntBASIC14.56□□□□□ -0.08
VBP1P61758 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
VBP1P61758 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.56□□□□□ -0.08
VBP1P61758 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.56□□□□□ -0.08
VBP1P61758 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.56□□□□□ -0.08
VBP1P61758 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 MIR4492-201ENST00000581627 80 ntBASIC14.56□□□□□ -0.08
VBP1P61758 TERC-201ENST00000602385 541 ntBASIC14.56□□□□□ -0.08
VBP1P61758 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
VBP1P61758 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
VBP1P61758 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VBP1P61758 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VBP1P61758 Z83836.1-201ENST00000624605 1642 ntBASIC14.55□□□□□ -0.08
VBP1P61758 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 ST20-AS1-201ENST00000560255 4223 ntBASIC14.55□□□□□ -0.08
VBP1P61758 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VBP1P61758 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.55□□□□□ -0.08
VBP1P61758 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.55□□□□□ -0.08
VBP1P61758 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VBP1P61758 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 AC010947.1-201ENST00000623454 693 ntBASIC14.55□□□□□ -0.08
VBP1P61758 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 PTENP1-202ENST00000532280 3996 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms