Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS1BP61024 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC010203.1-204ENST00000548782 407 ntBASIC11.44□□□□□ -0.58
CKS1BP61024 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC011840.4-201ENST00000578471 627 ntBASIC11.44□□□□□ -0.58
CKS1BP61024 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 AC005363.2-201ENST00000618631 242 ntBASIC11.44□□□□□ -0.58
CKS1BP61024 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS1BP61024 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 POM121L4P-202ENST00000427789 1891 ntBASIC11.44□□□□□ -0.58
CKS1BP61024 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS1BP61024 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CKS1BP61024 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 HBZP1-201ENST00000354915 429 ntBASIC11.43□□□□□ -0.58
CKS1BP61024 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.43□□□□□ -0.58
CKS1BP61024 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 AC007292.2-201ENST00000593524 1812 ntBASIC11.43□□□□□ -0.58
CKS1BP61024 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CKS1BP61024 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
CKS1BP61024 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS1BP61024 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CKS1BP61024 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.42□□□□□ -0.58
CKS1BP61024 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CKS1BP61024 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.42□□□□□ -0.58
CKS1BP61024 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms