Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB5BP61020 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB5BP61020 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RAB5BP61020 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB5BP61020 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB5BP61020 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB5BP61020 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB5BP61020 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB5BP61020 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB5BP61020 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RAB5BP61020 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RAB5BP61020 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RAB5BP61020 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.68□□□□□ -0.38
RAB5BP61020 CKBP1-201ENST00000565489 1086 ntBASIC12.68□□□□□ -0.38
RAB5BP61020 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
RAB5BP61020 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB5BP61020 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB5BP61020 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.68□□□□□ -0.38
RAB5BP61020 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 AC092919.2-201ENST00000623631 1645 ntBASIC12.68□□□□□ -0.38
RAB5BP61020 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 NUTM2HP-201ENST00000442076 2498 ntBASIC12.68□□□□□ -0.38
RAB5BP61020 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB5BP61020 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB5BP61020 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB5BP61020 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RAB5BP61020 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RAB5BP61020 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 CSPG4P11-201ENST00000560634 4910 ntBASIC12.67□□□□□ -0.38
RAB5BP61020 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.67□□□□□ -0.38
RAB5BP61020 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB5BP61020 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.67□□□□□ -0.38
RAB5BP61020 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB5BP61020 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 AC092118.2-201ENST00000613495 667 ntBASIC12.67□□□□□ -0.38
RAB5BP61020 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms