Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.96□□□□□ -0.17
AP3S2P59780 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
AP3S2P59780 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.18
AP3S2P59780 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S2P59780 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
AP3S2P59780 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
AP3S2P59780 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.96□□□□□ -0.18
AP3S2P59780 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP3S2P59780 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP3S2P59780 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S2P59780 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S2P59780 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S2P59780 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP3S2P59780 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.95□□□□□ -0.18
AP3S2P59780 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 AL390755.1-201ENST00000623716 2027 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 RN7SL606P-201ENST00000472779 293 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 COX11P1-201ENST00000489116 835 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 AL355075.4-201ENST00000554988 638 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 AL441883.1-201ENST00000566170 1045 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.95□□□□□ -0.18
AP3S2P59780 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 AC124864.1-201ENST00000623408 392 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 MROH4P-201ENST00000431302 1578 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP3S2P59780 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.95□□□□□ -0.18
AP3S2P59780 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 AC007191.1-201ENST00000623179 2995 ntBASIC13.95□□□□□ -0.18
AP3S2P59780 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP3S2P59780 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.94□□□□□ -0.18
AP3S2P59780 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AP3S2P59780 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms