Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 AC241585.1-201ENST00000433527 519 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 RARRES2P9-201ENST00000565168 469 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 MIR3909-201ENST00000579518 119 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 AC073592.8-201ENST00000624126 511 ntBASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AC105233.2-201ENST00000523697 349 ntBASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AF228730.5-201ENST00000530288 346 ntBASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 AC012645.4-201ENST00000610691 1061 ntBASIC18.53■□□□□ 0.56
CHMP4BP1P59074 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP4BP1P59074 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 MTND6P24-201ENST00000440466 518 ntBASIC18.52■□□□□ 0.56
CHMP4BP1P59074 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 SERBP1P5-201ENST00000510079 1181 ntBASIC18.52■□□□□ 0.56
CHMP4BP1P59074 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 MIR4492-201ENST00000581627 80 ntBASIC18.52■□□□□ 0.56
CHMP4BP1P59074 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP4BP1P59074 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP4BP1P59074 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP4BP1P59074 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms