Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC137761.2-201ENST00000561729 223 ntBASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC145350.3-201ENST00000569033 163 ntBASIC12.18□□□□□ -0.46
HIST1H2BDP58876 WWOX-216ENST00000569818 525 ntBASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC133552.2-202ENST00000575694 574 ntBASIC12.18□□□□□ -0.46
HIST1H2BDP58876 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC009154.2-201ENST00000621177 724 ntBASIC12.18□□□□□ -0.46
HIST1H2BDP58876 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H2BDP58876 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 AC060766.5-201ENST00000590539 871 ntBASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 KRT8P49-201ENST00000604166 1432 ntBASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 AC011477.6-201ENST00000604980 1927 ntBASIC12.17□□□□□ -0.46
HIST1H2BDP58876 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H2BDP58876 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 AC132938.5-201ENST00000624980 1813 ntBASIC12.16□□□□□ -0.46
HIST1H2BDP58876 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BDP58876 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms