Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 TMBIM7P-203ENST00000641617 1718 ntBASIC14.13□□□□□ -0.15
CLDN12P56749 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN12P56749 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 AC139887.3-201ENST00000568585 713 ntBASIC14.13□□□□□ -0.15
CLDN12P56749 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN12P56749 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.13□□□□□ -0.15
CLDN12P56749 AL139288.1-201ENST00000623748 933 ntBASIC14.13□□□□□ -0.15
CLDN12P56749 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN12P56749 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN12P56749 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLDN12P56749 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN12P56749 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 PCDHA3-202ENST00000532566 4594 ntBASIC14.12□□□□□ -0.15
CLDN12P56749 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN12P56749 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN12P56749 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN12P56749 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLDN12P56749 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN12P56749 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN12P56749 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN12P56749 AC106795.1-205ENST00000512851 1056 ntBASIC14.12□□□□□ -0.15
CLDN12P56749 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN12P56749 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDN12P56749 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN12P56749 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDN12P56749 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN12P56749 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.12□□□□□ -0.15
CLDN12P56749 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN12P56749 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms