Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 SNX33P1-201ENST00000592116 1762 ntBASIC16.69■□□□□ 0.26
PTPN5P54829 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.69■□□□□ 0.26
PTPN5P54829 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN5P54829 AC073389.1-201ENST00000595595 795 ntBASIC16.69■□□□□ 0.26
PTPN5P54829 AC093726.1-201ENST00000608064 963 ntBASIC16.69■□□□□ 0.26
PTPN5P54829 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN5P54829 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN5P54829 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN5P54829 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 AL603756.1-201ENST00000606511 2163 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 FER1L4-210ENST00000615531 5998 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 AL080243.2-201ENST00000418783 582 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 AL079307.3-201ENST00000556114 283 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN5P54829 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 AL033527.5-201ENST00000641382 801 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN5P54829 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN5P54829 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN5P54829 AC093525.8-201ENST00000624099 1342 ntBASIC16.68■□□□□ 0.26
PTPN5P54829 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN5P54829 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN5P54829 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN5P54829 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN5P54829 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN5P54829 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN5P54829 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN5P54829 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN5P54829 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN5P54829 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN5P54829 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN5P54829 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms