Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 AL136982.4-201ENST00000437689 1740 ntBASIC15.54■□□□□ 0.08
EPHA4P54764 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 CICP6-201ENST00000457191 2729 ntBASIC15.54■□□□□ 0.08
EPHA4P54764 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.54■□□□□ 0.08
EPHA4P54764 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 AC087499.6-201ENST00000411576 835 ntBASIC15.54■□□□□ 0.08
EPHA4P54764 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 DOC2GP-202ENST00000514950 1163 ntBASIC15.54■□□□□ 0.08
EPHA4P54764 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.54■□□□□ 0.08
EPHA4P54764 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.54■□□□□ 0.08
EPHA4P54764 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.54■□□□□ 0.08
EPHA4P54764 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
EPHA4P54764 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
EPHA4P54764 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 AC007541.1-201ENST00000570282 1469 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 UBALD1-205ENST00000590891 2641 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
EPHA4P54764 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
EPHA4P54764 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 MEP1AP4-201ENST00000423244 1087 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 AC005034.1-201ENST00000426657 489 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 EEF1DP4-201ENST00000446006 880 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 GAPDHP21-201ENST00000450301 1010 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.53■□□□□ 0.08
EPHA4P54764 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.53■□□□□ 0.08
EPHA4P54764 AC140912.1-201ENST00000577171 1054 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.53■□□□□ 0.08
EPHA4P54764 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.53■□□□□ 0.08
EPHA4P54764 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 AC074044.1-201ENST00000609673 707 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 AL035252.4-201ENST00000624174 288 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 ME2P1-201ENST00000426028 1970 ntBASIC15.53■□□□□ 0.08
EPHA4P54764 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
EPHA4P54764 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
EPHA4P54764 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 AL691432.1-201ENST00000596308 1422 ntBASIC15.52■□□□□ 0.08
EPHA4P54764 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 AC008894.3-201ENST00000624324 3103 ntBASIC15.52■□□□□ 0.08
EPHA4P54764 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms