Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 C18orf15-201ENST00000623680 2534 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGA2P52926 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 CICP24-201ENST00000605464 2705 ntBASIC14.75□□□□□ -0.05
HMGA2P52926 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 AL136379.1-201ENST00000623471 2642 ntBASIC14.75□□□□□ -0.05
HMGA2P52926 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGA2P52926 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HMGA2P52926 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 AC117500.6-201ENST00000624871 588 ntBASIC14.75□□□□□ -0.05
HMGA2P52926 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGA2P52926 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGA2P52926 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGA2P52926 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 IGLL3P-201ENST00000412472 434 ntBASIC14.74□□□□□ -0.05
HMGA2P52926 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 AC096734.2-201ENST00000562054 433 ntBASIC14.74□□□□□ -0.05
HMGA2P52926 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGA2P52926 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.74□□□□□ -0.05
HMGA2P52926 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
HMGA2P52926 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGA2P52926 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGA2P52926 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HMGA2P52926 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms