Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 AC022144.1-201ENST00000602255 1580 ntBASIC15.12■□□□□ 0.01
EFNA3P52797 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.12■□□□□ 0.01
EFNA3P52797 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
EFNA3P52797 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 HIST3H2BA-201ENST00000436555 524 ntBASIC15.12■□□□□ 0.01
EFNA3P52797 SERBP1P5-201ENST00000510079 1181 ntBASIC15.12■□□□□ 0.01
EFNA3P52797 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.12■□□□□ 0.01
EFNA3P52797 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.12■□□□□ 0.01
EFNA3P52797 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 AL365330.1-201ENST00000607459 531 ntBASIC15.12■□□□□ 0.01
EFNA3P52797 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
EFNA3P52797 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
EFNA3P52797 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EFNA3P52797 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EFNA3P52797 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
EFNA3P52797 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 KRT8P12-202ENST00000472924 1397 ntBASIC15.11■□□□□ 0.01
EFNA3P52797 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
EFNA3P52797 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
EFNA3P52797 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
EFNA3P52797 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.11■□□□□ 0.01
EFNA3P52797 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.11■□□□□ 0.01
EFNA3P52797 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 AL035633.1-201ENST00000406139 838 ntBASIC15.11■□□□□ 0.01
EFNA3P52797 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.11■□□□□ 0.01
EFNA3P52797 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.11■□□□□ 0.01
EFNA3P52797 AC138761.1-201ENST00000584393 385 ntBASIC15.11■□□□□ 0.01
EFNA3P52797 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.11■□□□□ 0.01
EFNA3P52797 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
EFNA3P52797 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.11■□□□□ 0.01
EFNA3P52797 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
EFNA3P52797 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
EFNA3P52797 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EFNA3P52797 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.11■□□□□ 0.01
EFNA3P52797 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.1■□□□□ 0.01
EFNA3P52797 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.1■□□□□ 0.01
EFNA3P52797 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.1■□□□□ 0.01
EFNA3P52797 AL139010.1-201ENST00000454878 894 ntBASIC15.1■□□□□ 0.01
EFNA3P52797 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.1■□□□□ 0.01
EFNA3P52797 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.1■□□□□ 0.01
EFNA3P52797 SPDYE18-201ENST00000510091 1050 ntBASIC15.1■□□□□ 0.01
EFNA3P52797 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EFNA3P52797 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.1■□□□□ 0.01
EFNA3P52797 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.1■□□□□ 0.01
EFNA3P52797 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.1■□□□□ 0.01
EFNA3P52797 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms