Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.23■□□□□ 0.03
SMSP52788 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMSP52788 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.23■□□□□ 0.03
SMSP52788 PMS2P4-201ENST00000412466 1052 ntBASIC15.23■□□□□ 0.03
SMSP52788 AC005237.2-201ENST00000434368 219 ntBASIC15.23■□□□□ 0.03
SMSP52788 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.23■□□□□ 0.03
SMSP52788 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.23■□□□□ 0.03
SMSP52788 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.23■□□□□ 0.03
SMSP52788 MIR4745-201ENST00000577608 62 ntBASIC15.23■□□□□ 0.03
SMSP52788 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.23■□□□□ 0.03
SMSP52788 AC026120.1-201ENST00000611536 926 ntBASIC15.23■□□□□ 0.03
SMSP52788 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.23■□□□□ 0.03
SMSP52788 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.23■□□□□ 0.03
SMSP52788 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMSP52788 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.23■□□□□ 0.03
SMSP52788 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.22■□□□□ 0.03
SMSP52788 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.22■□□□□ 0.03
SMSP52788 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SMSP52788 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 SPDYE11-202ENST00000450699 704 ntBASIC15.22■□□□□ 0.03
SMSP52788 AC109322.1-201ENST00000524499 1264 ntBASIC15.22■□□□□ 0.03
SMSP52788 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 AC190387.1-201ENST00000551683 408 ntBASIC15.22■□□□□ 0.03
SMSP52788 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 SPDYE9P-201ENST00000570642 692 ntBASIC15.22■□□□□ 0.03
SMSP52788 SPDYE10P-202ENST00000612005 668 ntBASIC15.22■□□□□ 0.03
SMSP52788 SPDYE8P-202ENST00000612377 668 ntBASIC15.22■□□□□ 0.03
SMSP52788 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.22■□□□□ 0.03
SMSP52788 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.22■□□□□ 0.03
SMSP52788 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SMSP52788 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMSP52788 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SMSP52788 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
SMSP52788 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMSP52788 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms