Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
SLC9A3P48764 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC9A3P48764 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC9A3P48764 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC9A3P48764 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC9A3P48764 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC9A3P48764 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC9A3P48764 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC9A3P48764 PRAL-201ENST00000624952 3286 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC9A3P48764 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SLC9A3P48764 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 RNU1-129P-201ENST00000384064 167 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 PMS2P4-201ENST00000412466 1052 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 AL160237.2-201ENST00000556165 472 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 U1.21-201ENST00000580816 167 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 AL592424.1-201ENST00000563624 1536 ntBASIC14.91□□□□□ -0.02
SLC9A3P48764 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC9A3P48764 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
SLC9A3P48764 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC9A3P48764 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC9A3P48764 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC9A3P48764 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SLC9A3P48764 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 AL031432.2-201ENST00000566714 459 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 AL928711.1-201ENST00000570165 459 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 AL031055.1-201ENST00000606362 631 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 AC117500.6-201ENST00000624871 588 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 FAM215A-202ENST00000632077 792 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 319.8 ms