Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC245100.5-201ENST00000452108 331 ntBASIC15.94■□□□□ 0.14
CXCL12P48061 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.94■□□□□ 0.14
CXCL12P48061 AC106760.1-201ENST00000508690 800 ntBASIC15.94■□□□□ 0.14
CXCL12P48061 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.94■□□□□ 0.14
CXCL12P48061 AP001258.2-201ENST00000529891 490 ntBASIC15.94■□□□□ 0.14
CXCL12P48061 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.94■□□□□ 0.14
CXCL12P48061 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.94■□□□□ 0.14
CXCL12P48061 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.94■□□□□ 0.14
CXCL12P48061 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.94■□□□□ 0.14
CXCL12P48061 GGT3P-204ENST00000453783 1664 ntBASIC15.94■□□□□ 0.14
CXCL12P48061 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.94■□□□□ 0.14
CXCL12P48061 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.94■□□□□ 0.14
CXCL12P48061 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CXCL12P48061 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.94■□□□□ 0.14
CXCL12P48061 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 MSTO2P-201ENST00000314835 1709 ntBASIC15.94■□□□□ 0.14
CXCL12P48061 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL12P48061 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.93■□□□□ 0.14
CXCL12P48061 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CXCL12P48061 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.93■□□□□ 0.14
CXCL12P48061 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.93■□□□□ 0.14
CXCL12P48061 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CXCL12P48061 RHOQP1-201ENST00000555758 579 ntBASIC15.93■□□□□ 0.14
CXCL12P48061 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.93■□□□□ 0.14
CXCL12P48061 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.93■□□□□ 0.14
CXCL12P48061 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 AC005252.2-201ENST00000624630 1141 ntBASIC15.93■□□□□ 0.14
CXCL12P48061 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL12P48061 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL12P48061 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL12P48061 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
CXCL12P48061 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CXCL12P48061 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL12P48061 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 MIR326-201ENST00000362220 95 ntBASIC15.92■□□□□ 0.14
CXCL12P48061 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CXCL12P48061 SLC25A24P2-201ENST00000415059 510 ntBASIC15.92■□□□□ 0.14
CXCL12P48061 KRT18P64-201ENST00000434946 1219 ntBASIC15.92■□□□□ 0.14
CXCL12P48061 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.92■□□□□ 0.14
CXCL12P48061 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.92■□□□□ 0.14
CXCL12P48061 SLED1-202ENST00000512051 380 ntBASIC15.92■□□□□ 0.14
CXCL12P48061 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.92■□□□□ 0.14
CXCL12P48061 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.92■□□□□ 0.14
CXCL12P48061 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.92■□□□□ 0.14
CXCL12P48061 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CXCL12P48061 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CXCL12P48061 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CXCL12P48061 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL12P48061 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms