Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NEDD4P46934 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.98■□□□□ 0.63
NEDD4P46934 AC027369.6-201ENST00000525520 931 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.98■□□□□ 0.63
NEDD4P46934 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.97■□□□□ 0.63
NEDD4P46934 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 AC018892.3-201ENST00000623986 2499 ntBASIC18.97■□□□□ 0.63
NEDD4P46934 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 KRT8P12-202ENST00000472924 1397 ntBASIC18.97■□□□□ 0.63
NEDD4P46934 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.97■□□□□ 0.63
NEDD4P46934 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 AC004987.2-201ENST00000395959 1148 ntBASIC18.97■□□□□ 0.63
NEDD4P46934 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.97■□□□□ 0.63
NEDD4P46934 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.97■□□□□ 0.63
NEDD4P46934 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.97■□□□□ 0.63
NEDD4P46934 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEDD4P46934 AL512361.1-201ENST00000554200 418 ntBASIC18.97■□□□□ 0.63
NEDD4P46934 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.97■□□□□ 0.63
NEDD4P46934 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.97■□□□□ 0.63
NEDD4P46934 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NEDD4P46934 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
NEDD4P46934 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.96■□□□□ 0.63
NEDD4P46934 AC093214.1-201ENST00000511688 1107 ntBASIC18.96■□□□□ 0.63
NEDD4P46934 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.96■□□□□ 0.63
NEDD4P46934 AL844908.2-201ENST00000609461 460 ntBASIC18.96■□□□□ 0.63
NEDD4P46934 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEDD4P46934 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NEDD4P46934 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.95■□□□□ 0.62
NEDD4P46934 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 AC132872.4-202ENST00000622924 2756 ntBASIC18.95■□□□□ 0.62
NEDD4P46934 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NEDD4P46934 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.95■□□□□ 0.62
NEDD4P46934 AZGP1P1-201ENST00000411909 902 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms