Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SLC1A3P43003 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 AC023274.1-201ENST00000418278 595 ntBASIC14.93□□□□□ -0.02
SLC1A3P43003 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC1A3P43003 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC1A3P43003 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A3P43003 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC1A3P43003 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC1A3P43003 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A3P43003 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 AC002347.1-201ENST00000569543 541 ntBASIC14.92□□□□□ -0.02
SLC1A3P43003 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SLC1A3P43003 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A3P43003 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A3P43003 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A3P43003 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SLC1A3P43003 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SLC1A3P43003 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A3P43003 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 AC073439.1-201ENST00000624121 1774 ntBASIC14.91□□□□□ -0.02
SLC1A3P43003 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A3P43003 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A3P43003 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 RARRES2P8-201ENST00000566335 367 ntBASIC14.91□□□□□ -0.02
SLC1A3P43003 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 AC099522.2-201ENST00000607001 744 ntBASIC14.91□□□□□ -0.02
SLC1A3P43003 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms