Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC092902.6-201ENST00000641783 218 ntBASIC16.41■□□□□ 0.22
HADHAP40939 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HADHAP40939 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.4■□□□□ 0.22
HADHAP40939 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.4■□□□□ 0.22
HADHAP40939 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 AC069224.1-201ENST00000566372 1715 ntBASIC16.4■□□□□ 0.22
HADHAP40939 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HADHAP40939 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.4■□□□□ 0.22
HADHAP40939 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
HADHAP40939 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.4■□□□□ 0.22
HADHAP40939 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.4■□□□□ 0.22
HADHAP40939 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 AL135744.1-201ENST00000565098 629 ntBASIC16.4■□□□□ 0.22
HADHAP40939 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.4■□□□□ 0.22
HADHAP40939 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.4■□□□□ 0.22
HADHAP40939 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 AC010491.1-201ENST00000563101 2797 ntBASIC16.4■□□□□ 0.22
HADHAP40939 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HADHAP40939 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HADHAP40939 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.4■□□□□ 0.22
HADHAP40939 AC068418.2-201ENST00000577309 3703 ntBASIC16.4■□□□□ 0.22
HADHAP40939 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HADHAP40939 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HADHAP40939 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HADHAP40939 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.22
HADHAP40939 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
HADHAP40939 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
HADHAP40939 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.39■□□□□ 0.21
HADHAP40939 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.39■□□□□ 0.21
HADHAP40939 HTR5BP-201ENST00000430851 1154 ntBASIC16.39■□□□□ 0.21
HADHAP40939 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.39■□□□□ 0.21
HADHAP40939 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms