Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.71■□□□□ 0.91
RXRBP28702 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RXRBP28702 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RXRBP28702 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 RPS9P1-201ENST00000419943 583 ntBASIC20.71■□□□□ 0.91
RXRBP28702 AL354877.1-201ENST00000424412 413 ntBASIC20.71■□□□□ 0.91
RXRBP28702 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.71■□□□□ 0.91
RXRBP28702 AC012362.1-201ENST00000434906 739 ntBASIC20.71■□□□□ 0.91
RXRBP28702 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.71■□□□□ 0.91
RXRBP28702 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.71■□□□□ 0.91
RXRBP28702 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.71■□□□□ 0.91
RXRBP28702 AP002803.1-201ENST00000528836 498 ntBASIC20.71■□□□□ 0.91
RXRBP28702 RBM8B-201ENST00000555532 525 ntBASIC20.71■□□□□ 0.91
RXRBP28702 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.71■□□□□ 0.91
RXRBP28702 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RXRBP28702 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.71■□□□□ 0.91
RXRBP28702 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RXRBP28702 AC103810.10-201ENST00000606504 343 ntBASIC20.71■□□□□ 0.91
RXRBP28702 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.71■□□□□ 0.91
RXRBP28702 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.71■□□□□ 0.91
RXRBP28702 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RXRBP28702 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.7■□□□□ 0.91
RXRBP28702 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 AC005622.1-201ENST00000636801 1703 ntBASIC20.7■□□□□ 0.9
RXRBP28702 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.7■□□□□ 0.9
RXRBP28702 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 AL031731.1-201ENST00000642131 2094 ntBASIC20.7■□□□□ 0.9
RXRBP28702 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.7■□□□□ 0.9
RXRBP28702 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.7■□□□□ 0.9
RXRBP28702 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.7■□□□□ 0.9
RXRBP28702 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.7■□□□□ 0.9
RXRBP28702 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RXRBP28702 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.7■□□□□ 0.9
RXRBP28702 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RXRBP28702 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.7■□□□□ 0.9
RXRBP28702 AC051619.9-201ENST00000623237 597 ntBASIC20.7■□□□□ 0.9
RXRBP28702 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.7■□□□□ 0.9
RXRBP28702 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRBP28702 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RXRBP28702 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRBP28702 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 ACTBP8-201ENST00000403258 1108 ntBASIC20.69■□□□□ 0.9
RXRBP28702 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRBP28702 FAM8A4P-201ENST00000435433 1213 ntBASIC20.69■□□□□ 0.9
RXRBP28702 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRBP28702 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.69■□□□□ 0.9
RXRBP28702 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRBP28702 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 AP001002.3-201ENST00000623482 206 ntBASIC20.69■□□□□ 0.9
RXRBP28702 AC004923.1-202ENST00000642106 209 ntBASIC20.69■□□□□ 0.9
RXRBP28702 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RXRBP28702 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRBP28702 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRBP28702 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RXRBP28702 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms