Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC125807.1-201ENST00000483097 614 ntBASIC14.92□□□□□ -0.02
ABCD3P28288 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.92□□□□□ -0.02
ABCD3P28288 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.92□□□□□ -0.02
ABCD3P28288 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 AC026979.3-201ENST00000607315 403 ntBASIC14.92□□□□□ -0.02
ABCD3P28288 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ABCD3P28288 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.92□□□□□ -0.02
ABCD3P28288 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
ABCD3P28288 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 AL035456.1-201ENST00000456064 1369 ntBASIC14.91□□□□□ -0.02
ABCD3P28288 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.91□□□□□ -0.02
ABCD3P28288 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCD3P28288 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.91□□□□□ -0.02
ABCD3P28288 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.91□□□□□ -0.02
ABCD3P28288 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCD3P28288 AC051619.7-201ENST00000568314 623 ntBASIC14.91□□□□□ -0.02
ABCD3P28288 AC105021.1-202ENST00000570572 669 ntBASIC14.91□□□□□ -0.02
ABCD3P28288 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCD3P28288 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCD3P28288 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCD3P28288 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCD3P28288 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCD3P28288 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCD3P28288 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ABCD3P28288 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCD3P28288 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ABCD3P28288 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
ABCD3P28288 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ABCD3P28288 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ABCD3P28288 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ABCD3P28288 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ABCD3P28288 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCD3P28288 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms