Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.67□□□□□ -0.22
COL8A2P25067 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 AC087499.5-201ENST00000452760 1342 ntBASIC13.66□□□□□ -0.22
COL8A2P25067 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 PCDHA1-201ENST00000378133 2726 ntBASIC13.66□□□□□ -0.22
COL8A2P25067 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.66□□□□□ -0.22
COL8A2P25067 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 TERF1P3-201ENST00000505638 1227 ntBASIC13.66□□□□□ -0.22
COL8A2P25067 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.66□□□□□ -0.22
COL8A2P25067 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
COL8A2P25067 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL8A2P25067 AC011270.2-201ENST00000624293 2550 ntBASIC13.66□□□□□ -0.22
COL8A2P25067 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.66□□□□□ -0.22
COL8A2P25067 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL8A2P25067 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 CROCCP1-201ENST00000426910 5675 ntBASIC13.65□□□□□ -0.22
COL8A2P25067 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL8A2P25067 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COL8A2P25067 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL8A2P25067 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.65□□□□□ -0.22
COL8A2P25067 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.65□□□□□ -0.22
COL8A2P25067 FAM207CP-201ENST00000443486 507 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms