Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 AC008267.7-201ENST00000624570 1194 ntBASIC13.91□□□□□ -0.18
CCL1P22362 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CCL1P22362 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 CICP13-201ENST00000422015 2789 ntBASIC13.91□□□□□ -0.18
CCL1P22362 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL1P22362 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 AC023157.3-201ENST00000619086 2088 ntBASIC13.91□□□□□ -0.18
CCL1P22362 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL1P22362 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
CCL1P22362 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 AL355306.1-201ENST00000415580 579 ntBASIC13.9□□□□□ -0.18
CCL1P22362 AC142381.1-201ENST00000426099 345 ntBASIC13.9□□□□□ -0.18
CCL1P22362 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL1P22362 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.9□□□□□ -0.18
CCL1P22362 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL1P22362 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.9□□□□□ -0.18
CCL1P22362 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.9□□□□□ -0.18
CCL1P22362 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL1P22362 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CCL1P22362 AC092865.6-201ENST00000642101 219 ntBASIC13.9□□□□□ -0.18
CCL1P22362 ZNF259P1-201ENST00000407656 1365 ntBASIC13.9□□□□□ -0.18
CCL1P22362 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL1P22362 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL1P22362 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCL1P22362 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCL1P22362 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCL1P22362 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL1P22362 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 AC087481.3-201ENST00000602886 1894 ntBASIC13.89□□□□□ -0.19
CCL1P22362 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL1P22362 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms