Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RAB4AP20338 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB4AP20338 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB4AP20338 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 AL645728.1-201ENST00000366221 2101 ntBASIC12.47□□□□□ -0.41
RAB4AP20338 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB4AP20338 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 ME2P1-201ENST00000426028 1970 ntBASIC12.47□□□□□ -0.41
RAB4AP20338 FRMD8P1-201ENST00000440433 1524 ntBASIC12.47□□□□□ -0.41
RAB4AP20338 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.47□□□□□ -0.41
RAB4AP20338 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB4AP20338 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB4AP20338 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB4AP20338 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB4AP20338 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RAB4AP20338 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 AC027601.5-201ENST00000624065 2482 ntBASIC12.46□□□□□ -0.41
RAB4AP20338 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
RAB4AP20338 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB4AP20338 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB4AP20338 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms