Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.34■□□□□ 0.21
VCLP18206 DNAJB3-202ENST00000449667 1266 ntBASIC16.34■□□□□ 0.21
VCLP18206 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.34■□□□□ 0.21
VCLP18206 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.34■□□□□ 0.21
VCLP18206 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.34■□□□□ 0.21
VCLP18206 AC004835.2-201ENST00000603762 682 ntBASIC16.34■□□□□ 0.21
VCLP18206 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VCLP18206 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
VCLP18206 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.34■□□□□ 0.21
VCLP18206 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VCLP18206 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.34■□□□□ 0.21
VCLP18206 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VCLP18206 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VCLP18206 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VCLP18206 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
VCLP18206 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.33■□□□□ 0.21
VCLP18206 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
VCLP18206 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VCLP18206 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
VCLP18206 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.21
VCLP18206 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 CNN2P11-201ENST00000429351 262 ntBASIC16.33■□□□□ 0.2
VCLP18206 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.33■□□□□ 0.2
VCLP18206 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 AL135744.1-201ENST00000565098 629 ntBASIC16.33■□□□□ 0.2
VCLP18206 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 AL596442.2-201ENST00000610240 980 ntBASIC16.33■□□□□ 0.2
VCLP18206 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
VCLP18206 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.33■□□□□ 0.2
VCLP18206 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCLP18206 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 ADH5P3-201ENST00000433842 1137 ntBASIC16.32■□□□□ 0.2
VCLP18206 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 IGHV3-62-201ENST00000520057 340 ntBASIC16.32■□□□□ 0.2
VCLP18206 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.32■□□□□ 0.2
VCLP18206 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
VCLP18206 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms