Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 AC139713.2-201ENST00000641328 2723 ntBASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AC005229.1-201ENST00000392885 409 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 SOCS2P1-201ENST00000417727 557 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ENPP7P5-201ENST00000541031 1031 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AC244093.1-201ENST00000610837 814 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 INTS4P2-202ENST00000614726 2019 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AC068587.10-201ENST00000641210 219 ntBASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
CSB-PGBD3P0DP91 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 HAUS4P1-201ENST00000406739 1145 ntBASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AC007551.1-201ENST00000457394 519 ntBASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AC099548.2-209ENST00000480264 625 ntBASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AC108725.1-201ENST00000495472 409 ntBASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 AC005915.1-201ENST00000624912 2018 ntBASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSB-PGBD3P0DP91 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms