Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.91■□□□□ 0.46
TPM1P09493 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.91■□□□□ 0.46
TPM1P09493 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TPM1P09493 AL732292.2-201ENST00000609649 430 ntBASIC17.91■□□□□ 0.46
TPM1P09493 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.91■□□□□ 0.46
TPM1P09493 AL355877.3-201ENST00000622820 899 ntBASIC17.91■□□□□ 0.46
TPM1P09493 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM1P09493 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TPM1P09493 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TPM1P09493 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM1P09493 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM1P09493 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM1P09493 AC023157.3-201ENST00000619086 2088 ntBASIC17.91■□□□□ 0.46
TPM1P09493 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TPM1P09493 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM1P09493 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 AP002414.2-201ENST00000591780 3365 ntBASIC17.9■□□□□ 0.46
TPM1P09493 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.9■□□□□ 0.46
TPM1P09493 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 ELK2BP-201ENST00000415014 1224 ntBASIC17.9■□□□□ 0.46
TPM1P09493 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TPM1P09493 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.9■□□□□ 0.46
TPM1P09493 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM1P09493 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TPM1P09493 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TPM1P09493 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM1P09493 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.89■□□□□ 0.46
TPM1P09493 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TPM1P09493 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TPM1P09493 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TPM1P09493 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 AL009178.2-201ENST00000597278 2719 ntBASIC17.89■□□□□ 0.45
TPM1P09493 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TPM1P09493 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 FOSL1P1-201ENST00000511041 816 ntBASIC17.89■□□□□ 0.45
TPM1P09493 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TPM1P09493 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM1P09493 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TPM1P09493 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TPM1P09493 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM1P09493 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TPM1P09493 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM1P09493 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM1P09493 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM1P09493 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TPM1P09493 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM1P09493 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM1P09493 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM1P09493 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM1P09493 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM1P09493 AC006504.4-201ENST00000592118 1568 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms