Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CD48P09326 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD48P09326 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CD48P09326 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD48P09326 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CD48P09326 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CD48P09326 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.77■□□□□ 0.27
CD48P09326 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 ELL2P1-201ENST00000413990 1906 ntBASIC16.76■□□□□ 0.27
CD48P09326 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CD48P09326 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.76■□□□□ 0.27
CD48P09326 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.76■□□□□ 0.27
CD48P09326 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.76■□□□□ 0.27
CD48P09326 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.76■□□□□ 0.27
CD48P09326 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CD48P09326 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CD48P09326 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CD48P09326 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD48P09326 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
CD48P09326 AC092850.2-201ENST00000623821 2697 ntBASIC16.75■□□□□ 0.27
CD48P09326 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CD48P09326 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD48P09326 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.75■□□□□ 0.27
CD48P09326 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.75■□□□□ 0.27
CD48P09326 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.75■□□□□ 0.27
CD48P09326 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 ACTG1P14-201ENST00000446382 1122 ntBASIC16.75■□□□□ 0.27
CD48P09326 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.75■□□□□ 0.27
CD48P09326 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.75■□□□□ 0.27
CD48P09326 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.75■□□□□ 0.27
CD48P09326 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.75■□□□□ 0.27
CD48P09326 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD48P09326 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CD48P09326 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CD48P09326 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 CEND1P1-201ENST00000451006 455 ntBASIC16.74■□□□□ 0.27
CD48P09326 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms