Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TPM3P06753 TMPOP1-202ENST00000424642 1267 ntBASIC18.22■□□□□ 0.51
TPM3P06753 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.22■□□□□ 0.51
TPM3P06753 AC087163.2-201ENST00000457299 853 ntBASIC18.22■□□□□ 0.51
TPM3P06753 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.22■□□□□ 0.51
TPM3P06753 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 REXO1L3P-201ENST00000622202 1288 ntBASIC18.22■□□□□ 0.51
TPM3P06753 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TPM3P06753 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.21■□□□□ 0.51
TPM3P06753 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM3P06753 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM3P06753 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TPM3P06753 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TPM3P06753 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM3P06753 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TPM3P06753 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TPM3P06753 MYO15B-237ENST00000642007 4893 ntBASIC18.21■□□□□ 0.5
TPM3P06753 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TPM3P06753 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TPM3P06753 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.21■□□□□ 0.5
TPM3P06753 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.2■□□□□ 0.5
TPM3P06753 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TPM3P06753 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TPM3P06753 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.2■□□□□ 0.5
TPM3P06753 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.2■□□□□ 0.5
TPM3P06753 AC087641.1-201ENST00000557561 1021 ntBASIC18.2■□□□□ 0.5
TPM3P06753 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.2■□□□□ 0.5
TPM3P06753 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TPM3P06753 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms