Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.36■□□□□ 0.69
CHGBP05060 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHGBP05060 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.36■□□□□ 0.69
CHGBP05060 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHGBP05060 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 HAUS4P1-201ENST00000406739 1145 ntBASIC19.36■□□□□ 0.69
CHGBP05060 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.36■□□□□ 0.69
CHGBP05060 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.36■□□□□ 0.69
CHGBP05060 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 SPDYE18-201ENST00000510091 1050 ntBASIC19.36■□□□□ 0.69
CHGBP05060 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.36■□□□□ 0.69
CHGBP05060 AC010336.2-201ENST00000564226 506 ntBASIC19.36■□□□□ 0.69
CHGBP05060 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.36■□□□□ 0.69
CHGBP05060 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.36■□□□□ 0.69
CHGBP05060 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
CHGBP05060 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
CHGBP05060 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHGBP05060 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.35■□□□□ 0.69
CHGBP05060 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CHGBP05060 KRT8P12-202ENST00000472924 1397 ntBASIC19.35■□□□□ 0.69
CHGBP05060 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHGBP05060 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CHGBP05060 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.35■□□□□ 0.69
CHGBP05060 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.35■□□□□ 0.69
CHGBP05060 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHGBP05060 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.35■□□□□ 0.69
CHGBP05060 AC009477.1-201ENST00000452936 217 ntBASIC19.35■□□□□ 0.69
CHGBP05060 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.35■□□□□ 0.69
CHGBP05060 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.35■□□□□ 0.69
CHGBP05060 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.35■□□□□ 0.69
CHGBP05060 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHGBP05060 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHGBP05060 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 AC004840.1-201ENST00000636359 365 ntBASIC19.35■□□□□ 0.69
CHGBP05060 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.35■□□□□ 0.69
CHGBP05060 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHGBP05060 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
CHGBP05060 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHGBP05060 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
CHGBP05060 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.34■□□□□ 0.69
CHGBP05060 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.34■□□□□ 0.69
CHGBP05060 AC241585.1-201ENST00000433527 519 ntBASIC19.34■□□□□ 0.69
CHGBP05060 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.34■□□□□ 0.69
CHGBP05060 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.34■□□□□ 0.69
CHGBP05060 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms